Mycobacterium africanum Is Associated with Patient Ethnicity in Ghana
Identifieur interne : 000407 ( Main/Exploration ); précédent : 000406; suivant : 000408Mycobacterium africanum Is Associated with Patient Ethnicity in Ghana
Auteurs : Adwoa Asante-Poku [Ghana, Suisse] ; Dorothy Yeboah-Manu [Ghana] ; Isaac Darko Otchere [Ghana] ; Samuel Y. Aboagye [Ghana] ; David Stucki [Suisse] ; Jan Hattendorf [Suisse] ; Sonia Borrell [Suisse] ; Julia Feldmann [Suisse] ; Emelia Danso [Ghana] ; Sebastien Gagneux [Suisse]Source :
- PLoS Neglected Tropical Diseases [ 1935-2727 ] ; 2015.
Abstract
Url:
DOI: 10.1371/journal.pntd.0003370
PubMed: 25569290
PubMed Central: 4287525
Affiliations:
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Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author><author><name sortKey="Danso, Emelia" sort="Danso, Emelia" uniqKey="Danso E" first="Emelia" last="Danso">Emelia Danso</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana</addr-line></nlm:aff><country xml:lang="fr">Ghana</country><wicri:regionArea>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon</wicri:regionArea><orgName type="university">Université du Ghana</orgName><placeName><settlement type="city">Accra</settlement><settlement type="town">Legon (Ghana)</settlement><region type="region">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Gagneux, Sebastien" sort="Gagneux, Sebastien" uniqKey="Gagneux S" first="Sebastien" last="Gagneux">Sebastien Gagneux</name><affiliation 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type="doi">10.1371/journal.pntd.0003370</idno><date when="2015">2015</date><idno type="wicri:Area/Pmc/Corpus">000017</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Corpus" wicri:corpus="PMC">000017</idno><idno type="wicri:Area/Pmc/Curation">000017</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Curation">000017</idno><idno type="wicri:Area/Pmc/Checkpoint">000211</idno><idno type="wicri:explorRef" wicri:stream="Pmc" wicri:step="Checkpoint">000211</idno><idno type="wicri:Area/Ncbi/Merge">000744</idno><idno type="wicri:Area/Ncbi/Curation">000744</idno><idno type="wicri:Area/Ncbi/Checkpoint">000744</idno><idno type="wicri:Area/Main/Merge">000407</idno><idno type="wicri:Area/Main/Curation">000407</idno><idno type="wicri:Area/Main/Exploration">000407</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en" level="a" type="main"><italic>Mycobacterium africanum</italic> Is Associated with Patient Ethnicity in Ghana</title><author><name sortKey="Asante Poku, Adwoa" sort="Asante Poku, Adwoa" uniqKey="Asante Poku A" first="Adwoa" last="Asante-Poku">Adwoa Asante-Poku</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana</addr-line></nlm:aff><country xml:lang="fr">Ghana</country><wicri:regionArea>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon</wicri:regionArea><orgName type="university">Université du Ghana</orgName><placeName><settlement type="city">Accra</settlement><settlement type="town">Legon (Ghana)</settlement><region type="region">Région du Grand Accra</region></placeName></affiliation><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>University of Basel, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>University of Basel, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author><author><name sortKey="Yeboah Manu, Dorothy" sort="Yeboah Manu, Dorothy" uniqKey="Yeboah Manu D" first="Dorothy" last="Yeboah-Manu">Dorothy Yeboah-Manu</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana</addr-line></nlm:aff><country xml:lang="fr">Ghana</country><wicri:regionArea>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon</wicri:regionArea><orgName type="university">Université du Ghana</orgName><placeName><settlement type="city">Accra</settlement><settlement type="town">Legon (Ghana)</settlement><region type="region">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Otchere, Isaac Darko" sort="Otchere, Isaac Darko" uniqKey="Otchere I" first="Isaac Darko" last="Otchere">Isaac Darko Otchere</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana</addr-line></nlm:aff><country xml:lang="fr">Ghana</country><wicri:regionArea>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon</wicri:regionArea><orgName type="university">Université du Ghana</orgName><placeName><settlement type="city">Accra</settlement><settlement type="town">Legon (Ghana)</settlement><region type="region">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Aboagye, Samuel Y" sort="Aboagye, Samuel Y" uniqKey="Aboagye S" first="Samuel Y." last="Aboagye">Samuel Y. Aboagye</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana</addr-line></nlm:aff><country xml:lang="fr">Ghana</country><wicri:regionArea>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon</wicri:regionArea><orgName type="university">Université du Ghana</orgName><placeName><settlement type="city">Accra</settlement><settlement type="town">Legon (Ghana)</settlement><region type="region">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Stucki, David" sort="Stucki, David" uniqKey="Stucki D" first="David" last="Stucki">David Stucki</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>University of Basel, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>University of Basel, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author><author><name sortKey="Hattendorf, Jan" sort="Hattendorf, Jan" uniqKey="Hattendorf J" first="Jan" last="Hattendorf">Jan Hattendorf</name><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>University of Basel, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>University of Basel, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff4"><addr-line>Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author><author><name sortKey="Borrell, Sonia" sort="Borrell, Sonia" uniqKey="Borrell S" first="Sonia" last="Borrell">Sonia Borrell</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>University of Basel, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>University of Basel, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author><author><name sortKey="Feldmann, Julia" sort="Feldmann, Julia" uniqKey="Feldmann J" first="Julia" last="Feldmann">Julia Feldmann</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>University of Basel, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>University of Basel, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author><author><name sortKey="Danso, Emelia" sort="Danso, Emelia" uniqKey="Danso E" first="Emelia" last="Danso">Emelia Danso</name><affiliation wicri:level="4"><nlm:aff id="aff1"><addr-line>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana</addr-line></nlm:aff><country xml:lang="fr">Ghana</country><wicri:regionArea>Bacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon</wicri:regionArea><orgName type="university">Université du Ghana</orgName><placeName><settlement type="city">Accra</settlement><settlement type="town">Legon (Ghana)</settlement><region type="region">Région du Grand Accra</region></placeName></affiliation></author><author><name sortKey="Gagneux, Sebastien" sort="Gagneux, Sebastien" uniqKey="Gagneux S" first="Sebastien" last="Gagneux">Sebastien Gagneux</name><affiliation wicri:level="1"><nlm:aff id="aff2"><addr-line>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>Department of Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:aff id="aff3"><addr-line>University of Basel, Basel, Switzerland</addr-line></nlm:aff><country xml:lang="fr">Suisse</country><wicri:regionArea>University of Basel, Basel</wicri:regionArea><wicri:noRegion>Basel</wicri:noRegion></affiliation></author></analytic><series><title level="j">PLoS Neglected Tropical Diseases</title><idno type="ISSN">1935-2727</idno><idno type="eISSN">1935-2735</idno><imprint><date when="2015">2015</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><italic>Mycobacterium africanum</italic> is a member of the <italic>Mycobacterium tuberculosis</italic> complex (MTBC) and an important cause of human tuberculosis in West Africa that is rarely observed elsewhere. Here we genotyped 613 MTBC clinical isolates from Ghana, and searched for associations between the different phylogenetic lineages of MTBC and patient variables. We found that 17.1% (105/613) of the MTBC isolates belonged to <italic>M. africanum</italic>, with the remaining belonging to <italic>M. tuberculosis</italic> sensu stricto. No <italic>M. bovis</italic> was identified in this sample. <italic>M. africanum</italic> was significantly more common in tuberculosis patients belonging to the Ewe ethnic group (adjusted odds ratio: 3.02; 95% confidence interval: 1.67–5.47, p<0.001). Stratifying our analysis by the two phylogenetic lineages of <italic>M. africanum</italic> (i.e. MTBC Lineages 5 and 6) revealed that this association was mainly driven by Lineage 5 (also known as <italic>M. africanum</italic> West Africa 1). Our findings suggest interactions between the genetic diversity of MTBC and human diversity, and offer a possible explanation for the geographical restriction of <italic>M. africanum</italic> to parts of West Africa.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct></biblStruct><biblStruct><analytic><author><name sortKey="Brosch, R" uniqKey="Brosch R">R Brosch</name></author><author><name sortKey="Gordon, Sv" uniqKey="Gordon S">SV Gordon</name></author><author><name sortKey="Marmiesse, M" uniqKey="Marmiesse M">M Marmiesse</name></author><author><name sortKey="Brodin, P" uniqKey="Brodin P">P Brodin</name></author><author><name sortKey="Buchrieser, C" uniqKey="Buchrieser C">C Buchrieser</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Firdessa, R" uniqKey="Firdessa R">R Firdessa</name></author><author><name sortKey="Berg, S" uniqKey="Berg S">S Berg</name></author><author><name sortKey="Hailu, E" uniqKey="Hailu E">E 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uniqKey="Xia H">H Xia</name></author><author><name sortKey="Zhou, Y" uniqKey="Zhou Y">Y Zhou</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Rosenberg, Na" uniqKey="Rosenberg N">NA Rosenberg</name></author><author><name sortKey="Pritchard, Jk" uniqKey="Pritchard J">JK Pritchard</name></author><author><name sortKey="Weber, Jl" uniqKey="Weber J">JL Weber</name></author><author><name sortKey="Cann, Hm" uniqKey="Cann H">HM Cann</name></author><author><name sortKey="Kidd, Kk" uniqKey="Kidd K">KK Kidd</name></author></analytic></biblStruct><biblStruct><analytic><author><name sortKey="Abel, L" uniqKey="Abel L">L Abel</name></author><author><name sortKey="El Baghdadi, J" uniqKey="El Baghdadi J">J El-Baghdadi</name></author><author><name sortKey="Bousfiha, Aa" uniqKey="Bousfiha A">AA Bousfiha</name></author><author><name sortKey="Casanova, J L" uniqKey="Casanova J">J-L Casanova</name></author><author><name sortKey="Schurr, E" uniqKey="Schurr E">E 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Thye</name></author><author><name sortKey="Niemann, S" uniqKey="Niemann S">S Niemann</name></author><author><name sortKey="Walter, K" uniqKey="Walter K">K Walter</name></author><author><name sortKey="Homolka, S" uniqKey="Homolka S">S Homolka</name></author><author><name sortKey="Intemann, Cd" uniqKey="Intemann C">CD Intemann</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Ghana</li><li>Suisse</li></country><region><li>Région du Grand Accra</li></region><settlement><li>Accra</li><li>Legon (Ghana)</li></settlement><orgName><li>Université du Ghana</li></orgName></list><tree><country name="Ghana"><region name="Région du Grand Accra"><name sortKey="Asante Poku, Adwoa" sort="Asante Poku, Adwoa" uniqKey="Asante Poku A" first="Adwoa" last="Asante-Poku">Adwoa Asante-Poku</name></region><name sortKey="Aboagye, Samuel Y" sort="Aboagye, Samuel Y" uniqKey="Aboagye S" first="Samuel Y." last="Aboagye">Samuel Y. Aboagye</name><name sortKey="Danso, Emelia" sort="Danso, Emelia" uniqKey="Danso E" first="Emelia" last="Danso">Emelia Danso</name><name sortKey="Otchere, Isaac Darko" sort="Otchere, Isaac Darko" uniqKey="Otchere I" first="Isaac Darko" last="Otchere">Isaac Darko Otchere</name><name sortKey="Yeboah Manu, Dorothy" sort="Yeboah Manu, Dorothy" uniqKey="Yeboah Manu D" first="Dorothy" last="Yeboah-Manu">Dorothy Yeboah-Manu</name></country><country name="Suisse"><noRegion><name sortKey="Asante Poku, Adwoa" sort="Asante Poku, Adwoa" uniqKey="Asante Poku A" first="Adwoa" last="Asante-Poku">Adwoa Asante-Poku</name></noRegion><name sortKey="Asante Poku, Adwoa" sort="Asante Poku, Adwoa" uniqKey="Asante Poku A" first="Adwoa" last="Asante-Poku">Adwoa Asante-Poku</name><name sortKey="Borrell, Sonia" sort="Borrell, Sonia" uniqKey="Borrell S" first="Sonia" last="Borrell">Sonia Borrell</name><name sortKey="Borrell, Sonia" sort="Borrell, Sonia" uniqKey="Borrell S" first="Sonia" last="Borrell">Sonia Borrell</name><name sortKey="Feldmann, Julia" sort="Feldmann, Julia" uniqKey="Feldmann J" first="Julia" last="Feldmann">Julia Feldmann</name><name sortKey="Feldmann, Julia" sort="Feldmann, Julia" uniqKey="Feldmann J" first="Julia" last="Feldmann">Julia Feldmann</name><name sortKey="Gagneux, Sebastien" sort="Gagneux, Sebastien" uniqKey="Gagneux S" first="Sebastien" last="Gagneux">Sebastien Gagneux</name><name sortKey="Gagneux, Sebastien" sort="Gagneux, Sebastien" uniqKey="Gagneux S" first="Sebastien" last="Gagneux">Sebastien Gagneux</name><name sortKey="Hattendorf, Jan" sort="Hattendorf, Jan" uniqKey="Hattendorf J" first="Jan" last="Hattendorf">Jan Hattendorf</name><name sortKey="Hattendorf, Jan" sort="Hattendorf, Jan" uniqKey="Hattendorf J" first="Jan" last="Hattendorf">Jan Hattendorf</name><name sortKey="Stucki, David" sort="Stucki, David" uniqKey="Stucki D" first="David" last="Stucki">David Stucki</name><name sortKey="Stucki, David" sort="Stucki, David" uniqKey="Stucki D" first="David" last="Stucki">David Stucki</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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